Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788565.1_cds_XP_016469039.1_573
CDS Infomation

[gene=LOC107791445] [db_xref=GeneID:107791445] [protein=probable galacturonosyltransferase 10] [protein_id=XP_016469039.1] [location=join(26121..26273,29294..30745)] [gbkey=CDS]
Sequence

ATGAGGAGGAGGAACTCGGATTTCCGGCGGCCGGTAAGGCGGCGATTCTCCAATGTGTTT
TGGTTAACTGTGTGTGGATTGGCTATATTGCTGCTCATCATTTTGCTCAGCAGAGAAACT
CGCGATTCATCGTCTAGATTGGTTTATACTAAGAGGCCATATAGACATGATAGAAGTGGG
GATGGTCTCAACATCACTGAAGAAATGCTGAGGCCGGAATCAATGGCACGACAACTTAAT
GATCAGATTTCTCTCGCTAAGGCAATTGTCGTAATTGCAAAAGAAAGCAACAACCTTCAA
TTTGCATGGGAACTAAGCGCTCAAATCCGCAACTCACAGATGCTTCTTTCTAATGCTGCA
TCAAGAAGAAGTCCCTTGACGAACAGAGAATCAGAAAATGCAATTCGAGATATGGCACTT
CTGCTTTACCAAGCCCAGCAATTTCACTATGACAGTGCAACCATGTTTATGAGACTGAAA
GCTAAAATCCAAAGCCTTGAAGAACAGATGAACTCCTTCAGTGAGAAGAGTTCAAAATAT
GGACAAATAGCTGCTGAAGAAGTCCCTAAAAGTCTGTACTGCCTTGGTGTCCGGTTAACA
GCTGAATGGTTCAGAAGTTCAAATTTGGAGAGAAAACTCAAGGAAGAAAAGCAAGTAGCT
GCCAAACTTGTGGACACCGGTCTGTATCATTTCTGTGTATTTTCTGACAACATCCTTGCA
ACTTCAGTTGTGGTGAATTCAACAGCTATGAATTCCAAGAATCCTGATATGGTCGTCTTC
CACCTTGTAACTGACGAGGTGAACTACGCTGCAATGAAGGCATGGTTCACCATGAACAGT
TTCCGAGGAGTGACTGTTGATGTACAGAAGTTTGAAGACTTTAGTTGGTTAAATGCTTCA
TATGTACCTGTTCTCAAACAACTTCAAGACTCTGACACCCAGAACTACTACTTCTCTGGC
AACCATGATAACAGCCGAACTCCGATCAAGTTCAGAAACCCTAAATATCTATCTATGCTT
AACCATCTGAGGTTCTATATTCCAGAAGTTTTTCCTGCACTGAAGAAGGTTGTATTTCTT
GATGATGATGTTGTAGTGCAGAAGGATCTTTCAGCTCTGTTCTCCATAGACATGAATGGC
AATGTAAATGGTGCAGTGGAGACTTGCATGGAGACATTTCATAGATATCACAAGTACCTA
AATTATTCTCACCCACTTATACGTCAACATTTTGATCCTGATGCATGTGGGTGGGCCTTC
GGGATGAATGTTTTCGATTTGGTTGAGTGGCGAAAAAGGAATGTTACTGGCATATATCAT
TACTGGCAGGAAAAGAATGTCGACCGCACTTTGTGGAAGCTTGGCACACTACCACCTGGA
CTGCTGACCTTCTATGGATTGACAGAGGCTTTGAATCCTTCATGGCATGTCTTAGGTTTG
GGTTACACGAATGTCGATTCCAAATTGATAGAAAAGGGGGCTGTGCTGCATTACAATGGT
AACTCAAAACCCTGGTTGAAGATTGGTATCGAAAAGTACAAACCTCTTTGGGAAAAATAT
GTTGATTATGGTCATCCTTTATTACAACTTTGCAACTTTCACTAA

Peptide Sequence

PEP ID

XP_016469039.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 10 [Nicotiana tabacum]
Sequence

MRRRNSDFRRPVRRRFSNVFWLTVCGLAILLLIILLSRETRDSSSRLVYTKRPYRHDRSG
DGLNITEEMLRPESMARQLNDQISLAKAIVVIAKESNNLQFAWELSAQIRNSQMLLSNAA
SRRSPLTNRESENAIRDMALLLYQAQQFHYDSATMFMRLKAKIQSLEEQMNSFSEKSSKY
GQIAAEEVPKSLYCLGVRLTAEWFRSSNLERKLKEEKQVAAKLVDTGLYHFCVFSDNILA
TSVVVNSTAMNSKNPDMVVFHLVTDEVNYAAMKAWFTMNSFRGVTVDVQKFEDFSWLNAS
YVPVLKQLQDSDTQNYYFSGNHDNSRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFL
DDDVVVQKDLSALFSIDMNGNVNGAVETCMETFHRYHKYLNYSHPLIRQHFDPDACGWAF
GMNVFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEALNPSWHVLGL
GYTNVDSKLIEKGAVLHYNGNSKPWLKIGIEKYKPLWEKYVDYGHPLLQLCNFH

Transcript Sequence

Gene sequence data has not been registered.